Guide · RegulatoryUpdated October 16, 2026

A data processing agreement for clinical trials: what it must say and what to negotiate

Every vendor that handles participant data for you needs a GDPR Article 28 contract: the EDC, the ePRO provider, the CRO, the central lab. This guide walks through the clauses, the trial-specific points that standard templates miss, and a review checklist. Not legal advice.

  • Article 28 clauses explained
  • Sub-processors and transfers
  • Review checklist included

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Anatomy of a trial DPA (illustrative)
DPA-Study-DEMO-001.pdf3/9 complete
  1. 1

    Parties, roles and definitions

    Sponsor as controller, vendor as processor

    Complete
  2. 2

    Subject matter, duration, nature and purpose

    Complete
  3. 3

    Types of personal data and data subjects

    Participants, site staff

    Complete
  4. 4

    Documented instructions and transfers

    Draft
  5. 5

    Security measures (Annex)

    Draft
  6. 6

    Sub-processors and change notice

    Draft
  7. 7

    Assistance: rights, breaches, DPIA

    To do
  8. 8

    Return, deletion and archiving

    To do
  9. 9

    Audit and inspection

    To do
Demo outline. Structure varies; the mandatory content comes from Article 28(3).

The short answer

  • A DPA is a contract, not a policy. GDPR Article 28 requires a binding written contract (electronic form counts) whenever a processor handles personal data on behalf of a controller. In a trial that means sponsor to EDC vendor, sponsor to CRO, CRO to its own sub-vendors, and sponsor to central lab or courier.
  • The mandatory content is a list. The contract must set out the subject matter, duration, nature and purpose of the processing, the types of personal data and the categories of data subjects, and the controller rights and obligations. It must also contain eight operational commitments, covered below.
  • Copying the article is not enough. Regulators have criticised contracts that only restate Article 28(3). The useful DPA says how each duty is met for this study: which region, which roles, which sub-processors, which deletion route.
  • Trials add three tensions. Deletion at end of contract collides with long archiving duties, blinded and unblinded roles need separate access terms, and sites are often separate controllers who need their own arrangements.
  • Ask for it early. Put the DPA and the sub-processor list on the vendor evaluation checklist, not on the week before go-live.

Roles

Who needs a data processing agreement in a clinical trial

The GDPR attaches duties to roles, not to company types. The sponsor, or the university or hospital running an investigator-initiated study, normally decides why and how participant data is processed and is therefore the controller. A vendor that processes that data only on the sponsor behalf, such as the EDC or ePRO platform, the CRO doing data management, a central lab or an imaging core lab, is a processor. Where a processor engages another company to help, that company is a sub-processor, and the chain of contracts must follow the data.

Sites are the awkward case. A hospital holds the medical record as a controller in its own right and then shares extracts with the sponsor. Depending on the member state and how the study is organised, sponsor and site may be treated as separate controllers or as joint controllers, which needs an arrangement under Article 26 rather than an Article 28 contract. This is a point for your data protection officer and your national guidance, not for a template. Our GDPR-compliant clinical trial software guide covers role allocation at a high level, and the HIPAA versus GDPR comparison shows how the same chain looks under US rules.

The contract chain

Which agreement sits between whom

A typical sponsor-led study. Your own structure may differ, so confirm roles with your data protection officer.

RelationshipUsual GDPR rolesAgreement to expect
Sponsor and EDC / ePRO / eConsent vendorSponsor controller, vendor processorArticle 28 DPA with security annex and sub-processor list
Sponsor and CROSponsor controller, CRO processor (for the tasks transferred)Article 28 DPA, usually inside or beside the master services agreement
CRO and its sub-vendorsCRO processor, sub-vendor sub-processorFlow-down terms with the same obligations, authorised by the sponsor
Sponsor and central lab, imaging core, courierProcessor eachArticle 28 DPA per vendor; coded data only where possible
Sponsor and site / investigatorSeparate or joint controllers depending on setupClinical trial agreement with data protection terms; Article 26 arrangement if joint
University sponsor and hosted platformUniversity controller, vendor processorDPA plus an internal note on who the university data protection officer is

Orientation only. Role allocation is a legal assessment of who decides purposes and means.

Article 28(3)

The clauses the regulation requires

Article 28(3) says processing by a processor must be governed by a contract that is binding on the processor and sets out the subject matter and duration, the nature and purpose, the type of personal data, the categories of data subjects, and the obligations and rights of the controller. It then lists what the processor must commit to. Read the current text, because the exact wording is what a supervisory authority will test your contract against. In plain terms, the commitments are these.

Processing only on documented instructions

The processor acts on the controller documented instructions, including on transfers to third countries, unless law requires otherwise, in which case it tells the controller first where it may. In practice the instructions are the contract, the study configuration and any written change requests. Agree that email or a ticket counts as a written instruction as long as a record is kept, and say who on the sponsor side can give one.

Confidentiality of staff

Everyone authorised to process the data is bound by confidentiality, by contract or by statute. For a platform vendor, ask how staff access to customer data is limited and logged. For a study, add the rule that blinded information is never exposed to blinded roles.

Security of processing

The processor must take the measures Article 32 requires. Put these in an annex instead of a sentence, so they can be reviewed and updated: hosting region, encryption at rest and in transit, role-based access, audit logging, backups, incident handling. Our vendor security questionnaire guide lists the questions to put to a vendor before you fill in that annex.

Sub-processors

The processor may not engage another processor without the controller prior specific or general written authorisation. With general authorisation it must tell the controller about intended additions or replacements and give a chance to object. The same data protection obligations must be passed down in a contract, and the original processor remains liable to the controller if the sub-processor fails. A usable DPA names the current sub-processors, their purpose and their region, and sets a notice period for changes.

Assistance with data subject rights and with the controller duties

The processor helps the controller answer requests from participants (access, rectification, restriction, erasure where it applies) and helps with the security, breach notification, impact assessment and prior consultation duties in Articles 32 to 36. For breaches, the controller has its own notification window to the supervisory authority, so the DPA should oblige the processor to tell you without undue delay and say how, to whom and what information it will include. Our DPIA template for clinical trials shows where those processor facts feed in.

Return or deletion at the end

At the controller choice, the processor deletes or returns all personal data after the services end and deletes existing copies unless Union or member state law requires storage. This is the clause that needs trial-specific thought, covered in its own section below.

Information and audits

The processor must make available the information needed to show compliance and allow for and contribute to audits, including inspections, by the controller or an auditor it mandates. It must also tell the controller if it believes an instruction infringes data protection law. In a regulated trial, add that the vendor will support sponsor audits and regulatory inspections, and say how a remote audit works.

See the security facts a DPA annex needs

Build a study in the free sandbox and see roles, audit trail and exports in practice before you put them in a contract. Hosting in the EU (Frankfurt) or the USA (N. Virginia) is chosen per study.

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Trial specifics

Three points a generic template gets wrong for trials

Software-as-a-service DPAs are written for customer relationship data and marketing tools. Clinical trial data is health data, a special category, and it sits inside a regulated record. Before you sign a vendor standard paper, check the following.

Deletion at termination versus archiving duties

A template may promise deletion within a few weeks of termination. A trial usually has to keep the records much longer. Under the EU Clinical Trials Regulation the sponsor and investigator keep the clinical trial master file for at least 25 years after the end of the trial (check Article 58 and national rules), and good clinical practice expects records to be retrievable for inspection. Decide who holds the archive, in what format, and what the processor does in the meantime. Common answers are a controlled export handed to the sponsor, then a certified deletion, or a defined retention period at the vendor. Whichever you pick, write it down. Our data archiving and retention guide and the database lock checklist help with the export side.

Roles, blinding and pseudonymisation

Participant data in an EDC is usually coded, but coded is not anonymous: under the GDPR pseudonymised data is still personal data, and the DPA applies. What the DPA can do is limit exposure by design. Say which roles see names and which see only coded IDs, and keep treatment allocation away from blinded staff. See data pseudonymisation in EDC for the design pattern.

Transfers outside the EEA

Hosting region, support access and sub-processors are three separate transfer questions. A vendor can host in the EU and still allow a support team in another country to reach data. The DPA should cover all three and name the transfer mechanism, for example standard contractual clauses, for any restricted transfer. If your study has US sites, the HIPAA versus GDPR guide explains why the two regimes need different paper.

Checklist

How to review a vendor DPA before you sign

Tick these off with your data protection officer. The right-hand column says what good evidence looks like.

Roles and parties are correct

Legal entity names, contact for data protection questions, and a clear statement that the sponsor is the controller.

Description of processing is specific

This study, these data categories, these data subjects (participants, site staff), this duration, not a generic service description.

Instructions and transfers are controlled

Instruction channel named; hosting region fixed in writing; support access and any restricted transfer addressed.

Security annex is concrete

Encryption, access control, audit logging, backups and incident process described and updatable by notice.

Sub-processors are listed with a change process

Name, purpose, region, and a notice period with a right to object.

Breach notice is operational

A stated time limit to inform you, content of the notice, and a named contact on both sides.

End of contract fits the archive plan

Export format, timing, certified deletion, and an explicit carve-out for retention you require.

Audit and inspection rights work in practice

Remote audit route, inspector access, and cooperation with regulatory inspections.

In Capture

Facts you can put in the security annex

Capture hosts studies in the EU (Frankfurt) or the USA (N. Virginia), with AES-256 encryption at rest and TLS in transit. Access is role-based with row-level security at the database layer, site coordinators see participant names while researchers see coded IDs, the field-level audit trail records user, time, old value, new value and reason, and clinical data is soft-deleted only. Use the free sandbox to check each of these yourself, and raise the DPA and sub-processor list with the team during evaluation, as you would with any vendor.

  • Region chosen per study.
  • PII segregated by role.
  • Append-only audit trail you can export.
Read the security overview
DPA readiness for a demo study

Annex items

6 of 8

Open

2

  • Hosting region statedEU (Frankfurt)
  • Role-based access describedCoded IDs for researchers
  • Audit trail export agreed
  • Encryption at rest and in transit
  • Sub-processor list receivedAsk vendor
  • Deletion versus archive clauseNeeds sponsor decision
Demo data. Your DPA annex should describe your actual configuration.

Process

From shortlist to signed DPA in five steps

  1. 1

    Map the data flows

    List every system and vendor that will touch participant data, including couriers, labs and support tools, and mark where identifiable data goes and where only coded data goes.

  2. 2

    Allocate roles with your DPO

    Decide controller, joint controller and processor for each relationship. Write the result in the data protection section of the protocol or the study data management plan.

  3. 3

    Request paperwork early

    Ask each vendor for its DPA, security annex and sub-processor list while you evaluate, alongside the validation pack. Compare them with the checklist above.

  4. 4

    Negotiate the trial-specific clauses

    Settle deletion versus archive, blinding, transfers and audit support. Do not accept generic wording on these just because the rest is acceptable.

  5. 5

    File and maintain

    Store the signed DPA in the trial master file, review the sub-processor list at each notice, and re-check the annex when the study configuration changes.

FAQ

Questions teams ask before they switch

Something not covered here? Ask us directly.

What is a data processing agreement in a clinical trial?

A written contract between the party that decides how participant data is processed (usually the sponsor, as controller) and a vendor that processes it on its behalf (as processor), required by GDPR Article 28. It sets out the scope of the processing and the processor commitments on instructions, confidentiality, security, sub-processors, assistance, deletion or return, and audits.

Do I need a DPA with my EDC vendor?

If the vendor processes personal data for you under the GDPR, yes. Participant data in an EDC is personal data even when coded, so a hosted EDC, ePRO or eConsent vendor is normally a processor and needs an Article 28 contract.

Is a DPA the same as a clinical trial agreement?

No. A clinical trial agreement sets out scientific, financial and legal terms between sponsor and site or CRO. A DPA covers data protection duties. They can be combined in one document, but the Article 28 content has to be there.

Who is the controller in an investigator-initiated study?

Commonly the university or hospital sponsoring the study, but it depends on who decides purposes and means. Sponsor and site can also be joint controllers in some member states. Ask your data protection officer rather than assume.

What should the DPA say about deletion when the contract ends?

Article 28(3) lets the controller choose deletion or return, with an exception where law requires storage. For trials, add the archive plan: what is exported, in what format, who keeps it for the required retention period, and when the processor certifies deletion.

Are sub-processors allowed?

Yes, with the controller prior specific or general written authorisation. With general authorisation the processor must inform you of changes and give you a chance to object, and it must bind the sub-processor to the same obligations.

Does hosting in the EU remove the need for transfer safeguards?

Not by itself. Support access, sub-processors and remote administration from outside the EEA can also be transfers. The DPA should address each and name the legal mechanism.

Is this legal advice?

No. It is orientation for QA, regulatory and data protection teams. Check the current GDPR text, EDPB guidance and your national authority, and take advice on your own contracts.

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